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Contig List

Contig 1 (3442), Contig 2 (24499), Contig 3 (8400), Contig 4 (902), Contig 5 (491), Contig 6 (508), Contig 7 (214), Contig 8 (71), Contig 9 (85), Contig 10 (95), Contig 11 (102), Contig 12 (255), Contig 13 (251), Contig 14 (110), Contig 15 (507), Contig 16 (308), Contig 17 (128), Contig 18 (413), Contig 19 (291), Contig 20 (481), Contig 21 (137), Contig 22 (189), Contig 23 (370), Contig 24 (336), Contig 25 (213), Contig 26 (253), Contig 27 (459), Contig 28 (475), Contig 29 (550), Contig 30 (254), Contig 31 (70), Contig 32 (177), Contig 33 (131), Contig 34 (159), Contig 35 (94)

CONTIG 1

Statistics

Contig id: 1
Contig length: 3442
Avg. contig coverage: 5.36084
Consensus contains: A: 1068 C: 619 G: 630 T: 1122 N: 3 *: 0

Num reads: 50
Avg. read length: 369.04
Reads contain 18332 bases, 73 Ns and 47 gaps.

Contig

0
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- TCTAAATCGTGCACAGGTTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTTCGGACTGAA
U13a05b08.t1-  CTAAATCNTGCACAGGNTCNGGCGAAGATCGCAGAAATNAAAGCTAAGTTCGGACTGAA
U13a04d03.t1-                 GTTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTTCGGACTGAA
Consensus: TCTAAATCGTGCACAGGTTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTTCGGACTGAA

60
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- AGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGACGCATAATAGCT
U13a05b08.t1- AGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACcTGGGACGCATAATAGCT
U13a04d03.t1- AGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGAcGCATAATAGcT
U13a05c03.t1-                  GGGCAAAGAGGCAATTATTCATTACCTGGGACGCATAATAGcT
Consensus: AGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGACGCATAATAGCT

120
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- TcTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAATCAGCGGG
U13a05b08.t1- TcTGTGCGCCGGAcGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCaTAAATCAGCGGG
U13a04d03.t1- TCTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAATCAGCGGG
U13a05c03.t1- TCTGTGCGCC*GACGTTGCCGCGCTAACAGgcGCAACAGTAACCAGCATAAaTCAGC*GG
U13a02d07.t1-                      CGCTAACAGGcGCAACAGTAACCAGCATAAaTCAGCGGG
U13a03f02.t1+                                               CATAAATCANCGGG
Consensus: TCTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAATCAGCGGG

180
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG
U13a05b08.t1- GATcTGGCTAGAATTCGGCCGGGGcGGCCAGATAAAAAAaATCCTTAGCtTTCGCTAAGg
U13a04d03.t1- GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG
U13a05c03.t1- GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG
U13a02d07.t1- GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG
U13a03f02.t1+ GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG
Consensus: GATCTGGCTAGAATTCGGCCGGGGCGGCCAGATAAAAAAAATCCTTAGCTTTCGCTAAGG

240
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- ATGGTTTCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCTCGAGAATTACCCT
U13a05b08.t1- ATGGTTTCTAGTGATGACCCTGCTGAANGGTTcGCTGACCATTTCCTCGAGAATTACCCT
U13a04d03.t1- ATGGTTTCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCTCGAGAATTACCCT
U13a05c03.t1- ATGGTTTCTAGCGATGACCCTGCTGATNGGTTCGCTGACCATTTCCTCGAGAATTACCCT
U13a02d07.t1- ATGGTTTCTAGCGATGACCCTGCTGATTGgTTCGCTGACCATTTCCTCGAGAATTACCCT
U13a03f02.t1+ ATGGTTTCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCTCGAGAATTACCCT
U13a03g11.t1-                                                  aGAATTACCCT
Consensus: ATGGTTTCTAGCGATGACCCTGCTGATTGGTTCGCTGACCATTTCCTCGAGAATTACCCT

300
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a05b08.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a04d03.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a05c03.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a02d07.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a03f02.t1+ CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
U13a03g11.t1- CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT
Consensus: CACTAAAGGGAATACATAGGATCCATGAGAATGTGTGGTCAGTAAGCAAAATGACAAAGT

360
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- TTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
U13a05b08.t1- NTGCGTGCGACTGCTGACCACAGTCAGGGGGTcTGTCtTACAGGAGGCTGAAGGCAAATT
U13a04d03.t1- CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
U13a05c03.t1- CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
U13a02d07.t1- CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
U13a03f02.t1+ CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
U13a03g11.t1- CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT
Consensus: CTGCGTGCGACTGCTGACCACAGTCAGGGGGTCTGTCTTACAGGAGGCTGAAGGCAAATT

420
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
U13a05b08.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
U13a04d03.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
U13a05c03.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
U13a02d07.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
U13a03f02.t1+ TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAgTC
U13a03g11.t1- TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC
Consensus: TTAATTAATTAATTAAATGCTAACAGCACTTAGGCCTCTTCCGTGGGGGTTCTTTAAGTC

480
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a05b08.t1- AGACCCTCTATGTTTcTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATcTGCT
U13a04d03.t1- AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a05c03.t1- AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a02d07.t1- AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a03f02.t1+ AgACCCTCTATGTTTCTGTGTCTTAgAAAAGGAgAAAACTAGGCCCACTCAGCATCTGCT
U13a03g11.t1- AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a05f04.t1+                      CTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT
U13a03g10.t1-                                                   AGCATcTGCT
Consensus: AGACCCTCTATGTTTCTGTGTCTTAGAAAAGGAGAAAACTAGGCCCACTCAGCATCTGCT

540
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a05b08.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a04d03.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a05c03.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a02d07.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a03f02.t1+ AgACCAGGTACCTTCTACAAGAG                                     
U13a03g11.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a05f04.t1+ AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTa            
U13a03g10.t1- AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG
U13a06g05.p2-                                       CATTCCATTATGGCGGAAATGG
Consensus: AGACCAGGTACCTTCTACAAGAGTGCTGTGCAGGGAAACATTCCATTATGGCGGAAATGG

600
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a05b08.t1- TCTGTATCTGTGCtGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGA      
U13a04d03.t1- TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a05c03.t1- TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a02d07.t1- TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a03g11.t1- TCTGTATCTGTGCTGTCCAATGcGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a03g10.t1- TCTGTATcTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
U13a06g05.p2- TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG
Consensus: TCTGTATCTGTGCTGTCCAATGCGGAGCCCCGAGCCACCTGTGGCTCAACTTGAAATATG

660
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01g01.t1- GCTTGTGCAACTGAGAAATTGGG                                     
U13a04d03.t1- GCTTGTGCAACTGAGAAAT                                         
U13a05c03.t1- GCTTGTGCAACTGAGAAATTGAATTTTTAATTTTATTTAAATTTAATTTATTTAAATTTA
U13a02d07.t1- GCTTGTGCAACTGAGAAATTGAATTTTTAATTTTATTTAAATTTAATTTATTTAAATTTA
U13a03g11.t1- GNTTGT                                                      
U13a03g10.t1- GCTTGTGCAACTGANAAA*TGAATTTTTAATTTTATTTAAATTTAATTTATTTAAATTTA
U13a06g05.p2- GCTTGTGCAACTGGGAAATTGAATTTTTAATTTTATTTAAATTTAATTTATTTAAATTTA
U13a03b04.t1+                                                     CCCATTTA
Consensus: GCTTGTGCAACTGAGAAATTGAATTTTTAATTTTATTTAAATTTAATTTATTTAAATTTA

720
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05c03.t1- AAGTTAAATAGCTACATATGGCTATTGGTTCCAGCACTGGTGGTCATTGCTCTTCTAGAA
U13a02d07.t1- AAGTTAAATAGNTACATATGGNTATTGGTTC                             
U13a03g10.t1- AAGTTAAATAGCTACATATGGCTATTGGTTCCAGCACTGGTGGTCATTGcTcTTCTAGAA
U13a06g05.p2- AAGTTAAATAGCTACATATGGCTATTGGTTCCAGCACTGGTGGTCATTGCTCTTCTAGAA
U13a03b04.t1+ AAGTTAAATACCTACATATGGCTATTGGTTCCAgCACTGGTGGTCATTGCTCTTCTAGAA
Consensus: AAGTTAAATAGCTACATATGGCTATTGGTTCCAGCACTGGTGGTCATTGCTCTTCTAGAA

780
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05c03.t1- TGTTGAGGTGTTTGTGGTGAGGTAAAGCCTGGTAATGTTGTTTAGGATGTCATAGTG   
U13a03g10.t1- TGTTGAGGTGTTTGTGGTGAGGTAAAGCCTGGTAATGTTGTTTAGGATGTCATAGTGATC
U13a06g05.p2- TGTTGAGGTGTTTGTGGTGAGGTAAAGCCTGGTAATGTTGTTTAGGATGTCATAGTGATC
U13a03b04.t1+ TGTTGAGGTGTTTGTGGTGAGGTAAAGCCTGGTAATGTTGTTTAGGATGTCATAGTGATC
U13a02f11.t1-      ANGTGTTTGtGGTGAGGTAAAGCCTGGtAAtGttGTTTAGGATGTCATAGTGATC
U13a06d07.t1+       CCTGTTTGTGGTGAGGTAAANCCTGGTAATGTTGTTTAGGATGTCATAgTGATC
Consensus: TGTTGAGGTGTTTGTGGTGAGGTAAAGCCTGGTAATGTTGTTTAGGATGTCATAGTGATC

840
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03g10.t1- AGGAGGCCACAGCCTCCCCCCGATCCAGCACAGCTAGAAACCAGGCAAGAGAACTGAAAG
U13a06g05.p2- AGGAGGCCACAGCCTCCCCCCGATCCAGCACAGCTAGAAACCAGGCAAGAGAACTGAAAG
U13a03b04.t1+ AGGAGGCCACAGCCTCCCCCCGATCCAGCACAGCTAgAAACCAgGCAAgAGAACTGAAAG
U13a02f11.t1- AGGAGGCCACAGCCTCCCCCCGATCCAGCACAGCTAGAAACCAGGCAAGAGAACTGAAAG
U13a06d07.t1+ AGGAGGCCACAGCCTCCCCCCGATCCAGCaCAGCTAGAAACCAGGCAAGAGAACTGAAAg
Consensus: AGGAGGCCACAGCCTCCCCCCGATCCAGCACAGCTAGAAACCAGGCAAGAGAACTGAAAG

900
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03g10.t1- AAGCTATTCAAAGGCTCCCCTGCATCCTAAAGGCAATAGCATGTTTGACCAGGGCAGCCT
U13a06g05.p2- AAGCTATTCAAAGGCTCCCCTGCATCCTAAAGGCAATAGCATGTTTGACCAGGGCAGCCT
U13a03b04.t1+ AAGCTATTCA                                                  
U13a02f11.t1- AAGCTATTCAAAGGCTCCCCTGCATCCTAAAGGCAATAGCATGTTTGACCAGGGCAGCCT
Consensus: AAGCTATTCAAAGGCTCCCCTGCATCCTAAAGGCAATAGCATGTTTGACCAGGGCAGCCT

960
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03g10.t1- TCCTGCTCTGTGGGAATGGGGCTCCTTCAGTGGCCAAGACGGCCTTCAATT         
U13a06g05.p2- TCCTGCTCTGTGGGAATGGGGCTCCTTCAGTGGCCAAGACGGCCTTCAATTCAGTTTCTC
U13a02f11.t1- TCCTGCTCTGTGGGAATGGGGCTCCTTCAGTGGCCAAGACGGCCTTNAATTCAGTTTTT 
U13a05d09.t1+                        CCTTCAGTGGCCAAGACGGCCTTCAATTCAGTTTCTC
U13a010b08.t1+                                            ATTCAATTCATTTTCTC
Consensus: TCCTGCTCTGTGGGAATGGGGCTCCTTCAGTGGCCAAGACGGCCTTCAATTCAGTTTCTC

1020
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06g05.p2- AgTTGCACAAGCCATGTTCCAAGTTGAGCCACAGGTGGcTCGGGGCTCCTCATTGGACAG
U13a05d09.t1+ AGTTGCACAAGCCATGTTCCAAGTTGAGCCACAGGTGGCTCGGGGCTCCTCATTGGACAG
U13a010b08.t1+ AGTTGCACAAGCCATGTTcCAAGTTGAGCCACAGGTGGCTCGGGGCTCc           
Consensus: AGTTGCACAAGCCATGTTCCAAGTTGAGCCACAGGTGGCTCGGGGCTCCTCATTGGACAG

1080
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06g05.p2- CACAGATATAGATCATTCCCACCATGATGGAAAGTTTCGCTGCACAGCACTCTTTTAGAA
U13a05d09.t1+ CACAGATATAGATCATTCCCACCATGATGGAAAGTTTCGCTGCACAGCACTCTTTTAGAA
Consensus: CACAGATATAGATCATTCCCACCATGATGGAAAGTTTCGCTGCACAGCACTCTTTTAGAA

1140
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06g05.p2- GATACAATCGGGGTGGCTCTTGCCCAGCAGAAGGGAGAGGGTGCAGGACTGGACATCACC
U13a05d09.t1+ GATACAATCGGGGTGGCTCTTGCCCAGCAGAAGGGAGAGGGTGCAGGACTGGACATCACC
U13a02b02.t1+  ATACaATCNGGGTGGCTCTTGCCCANCAGAAGGGAGAGGGTGCANGACTGGACATCACC
U13a06g05.t1-                                               NACTGGACATCACC
Consensus: GATACAATCGGGGTGGCTCTTGCCCAGCAGAAGGGAGAGGGTGCAGGACTGGACATCACC

1200
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06g05.p2- AGGGAACAAAAGTGTGTTCCTTTTCTTAAAATCCCCCAAGCAAACCTCATTCTCAGCTGT
U13a05d09.t1+ AGGGAACAAAAGTGTGTTCCTTTTCTTAAAATCCCCCAAGCAAACCTCATTCTCAGCTGT
U13a02b02.t1+ AGGGAACAAAAgTGTGTTCCTTTTCTTAAAATCCCCCAAGCAAACCTCATTCTCAGCTGT
U13a06g05.t1- AGGGAACAAAAGTGtGTTCCTTTTCTTaAAATCCCCCAAGCAAACCTCATTcTCAGCTGT
U13a03h09.t1+                                            ACCTCATTCTCANCTGT
Consensus: AGGGAACAAAAGTGTGTTCCTTTTCTTAAAATCCCCCAAGCAAACCTCATTCTCAGCTGT

1260
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06g05.p2- ATTCCATGTCTGGTTTCCAGGACAGAATGCTCCATTGGG                     
U13a05d09.t1+ ATTCCATGTCTGGTTTCCAGGACAGAATGCTCCATTGGGTTCTCAACACCAACTGGCTCC
U13a02b02.t1+ ATTCCATGTCTGGTTTCCAGGACAGAATGCTCCATTGGGTTCTCAACACCAACTGGCTCC
U13a06g05.t1- ATTCCATGTCTGGTTTCCAGGACAGAATGCTCCAT                         
U13a03h09.t1+ ATTCCATGTCTGGTTTCCANGACAGAATGCTCCATTGGGTTCTCAACACCAACTGGCTCC
Consensus: ATTCCATGTCTGGTTTCCAGGACAGAATGCTCCATTGGGTTCTCAACACCAACTGGCTCC

1320
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ CTGATTCAGGATCCAGGACTCAGGATATGCCTTGGCACCTCCTTCTTGAATTTCTCTTTT
U13a02b02.t1+ CTGATTCAGGATCCAGGACTCAGGATATGCCTTGGCACCTCCTTCTTGAATTTCTCTTTT
U13a03h09.t1+ CTGATTCAGGATCCAGGACTCAGGATATGCCTTGGCACCTCCTTCTTGAATTTCTCTTTT
Consensus: CTGATTCAGGATCCAGGACTCAGGATATGCCTTGGCACCTCCTTCTTGAATTTCTCTTTT

1380
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ GGTTTTTGGTTCCCAAATTGGCNAGATCCCTAGATCCTGCATTCCTTGCCCCTTCCCTCA
U13a02b02.t1+ GGTTTTTGGTTCCCAAATTGGCGAGATCCCTAGATCCTGCATTCCTTGCCCCTTCCCTCA
U13a03h09.t1+ GGTTTTTGGTTCCCAAATTGGCGAGATCCCTAGATCCTGCATTCCTTGCCCCTTCCCTCA
Consensus: GGTTTTTGGTTCCCAAATTGGCGAGATCCCTAGATCCTGCATTCCTTGCCCCTTCCCTCA

1440
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ ACTTTAAACTCCATTTTTGCCAAATCCAACAGTGGGGAGTCATTTGATGAATTTCTTCAA
U13a02b02.t1+ ACTTTAAACTCCATTTTTGCCNAATCCAACAGTGGGGAGTCATTTGATGAATTTCTTCAA
U13a03h09.t1+ ACTTTAAACTCCATTTTTGCCAAATCCAACAGTGGGGAGTCATTTGATGAATTTCTTCAA
U13a08a04.t1+                             ACAGTGGGGAGTCATTTGATGAATTTCTTCAA
U13a01e04.t1-                                 TGGGGAGTCATTTGATGAATTTCTTCAA
Consensus: ACTTTAAACTCCATTTTTGCCAAATCCAACAGTGGGGAGTCATTTGATGAATTTCTTCAA

1500
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ ATGATTTGCAAATGTTACCTTCAAAGAACAAACAGTTTAAAAGCTAATTGCTAATAAGAT
U13a02b02.t1+ ATGATTTGCAAATGTTACCTTCAAAGAACAAACAgTTTAAAAGCTAaTTGCTAATAAG  
U13a03h09.t1+ ATGATTTGCAAATGTTACCTTCAAAGAACAAACAGTTTAAAAGCTAATTGCTAATAAGAT
U13a08a04.t1+ ATGATTTGCAAATGTTACCTTCAAAGAACAAACAGTTTAAAAGCTAATTGCTAAtAAGAT
U13a01e04.t1- ATGATTTGCAAATGTtACCTTCAAAGAACAAACAGTTTAAAAGCTAATTGCTAATAAGAT
Consensus: ATGATTTGCAAATGTTACCTTCAAAGAACAAACAGTTTAAAAGCTAATTGCTAATAAGAT

1560
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ TATACTCATAGATGATATTAATATTGGGGAGTGTTTTAAAAATCGTGAAATCAACTTAGC
U13a03h09.t1+ TATACTCATAGATGATATTAATATTGGGGAGTGTTTTAAAAATCGTGAAATCAACTTAGC
U13a08a04.t1+ TATaCTCATAGATGATaTTAATATtGGGGAGTGTTTTAAAAATCGTGAAATCaACTTAGC
U13a01e04.t1- TATACTCATAGATGATATTAATATTGGGGAGTGTTTTAAAAATCGTGAAATCAACTTAGC
U13a03h12.t1+                                                           CC
Consensus: TATACTCATAGATGATATTAATATTGGGGAGTGTTTTAAAAATCGTGAAATCAACTTAGC

1620
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05d09.t1+ ATTTATCTCGAGATACACATCTGCCAAAAAGCATGAATTAG                   
U13a03h09.t1+ ATTTATCTCGAGATACACATCTGCCAAAAAGCATG*ATTAGATTTTTTACAAAACCACAT
U13a08a04.t1+ NTTTATCTCGAGATaCACATCTGCCAAAAAGCaTG*ATTAGATTTTTTACAAAACCACAT
U13a01e04.t1- ATTTATCTCGAGATACACATCTGCCAAAAAGCATG*ATTAGATTTTTTACAAAACCACAT
U13a03h12.t1+ ATTTATCTCgAGATACACATCTGCCAAAAAGCATG*ATTAGATTTTTTACAAAACCACAT
U13a05e06.t1-                      TGCCAAAAAGCATG*ATTAGATTTTTTACAAAACCACAT
U13a02a12.t1-                              AGCATG*ATTAGATTTTTTACAAAACCACAT
Consensus: ATTTATCTCGAGATACACATCTGCCAAAAAGCATGAATTAGATTTTTTACAAAACCACAT

1680
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03h09.t1+ CATTTCTTATTTGAAACTTAAAGTTTATGGGGGCTATTATGAGCAAGTAGAAACACTTTA
U13a08a04.t1+ CaTTTCTTATTTGAAACTTAaAGTTTAT                                
U13a01e04.t1- CATTTCTTATTTGAAACTTAAAGTTTATGGGGGCTATTATGAGCAAGTAGAAACACTTTA
U13a03h12.t1+ CATTTCTTATTTGAAACTTAAAGTTTATGGGGGCTATTATGAGCAAGTAGAAACACTTTA
U13a05e06.t1- CATTTCTTATTTGAAACTTAAAGTTtATGGGGGCTAtTATGAGCAAGTAGAAACACTTTA
U13a02a12.t1- CATTTCTTATTTGAAACTTAAAGTTTATGGGGGCTATTATGAGCAAGTAGAAaCACTTTA
Consensus: CATTTCTTATTTGAAACTTAAAGTTTATGGGGGCTATTATGAGCAAGTAGAAACACTTTA

1740
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03h09.t1+ TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA
U13a01e04.t1- TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA
U13a03h12.t1+ TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA
U13a05e06.t1- TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA
U13a02a12.t1- TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA
Consensus: TGATGGCTGTGATATAATCAATGCAGATTTAAAATGCTGTAGCAGATAACAATTTTCTTA

1800
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03h09.t1+ GAAGG                                                       
U13a01e04.t1- GAAGGAAAGAGGTCTGGATTTTCTCTTGAGAGAAATCTCAAATCTATAATTCTTGCATTA
U13a03h12.t1+ GAAGGAAAGAGGTCTGGATTTTCTCTTGAGAGAAATCTCAAATCTATAATTCTTGCATTA
U13a05e06.t1- GAAGGAAAGAGGTCTGGATTTTCTCTTGAGAGAAATCTCAAATCTATAATTCTtGCATTA
U13a02a12.t1- GAAGGAAAGAGGTCTGGATTTTCTCTTGAGAGAAATCTCAAATCTATAATTCTTGCATTA
U13a08c05.t1-                   TTTTCTCTTGAGAGAAATCTCAAATCtATAATTCTtGCATTA
Consensus: GAAGGAAAGAGGTCTGGATTTTCTCTTGAGAGAAATCTCAAATCTATAATTCTTGCATTA

1860
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01e04.t1- TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a03h12.t1+ TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a05e06.t1- TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a02a12.t1- TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a08c05.t1- TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a03c11.t1-                     AGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT
U13a010c07.t1+                               AAACCCAGTTATTATTTACAAAAAAGAAAT
U13a09d10.t1-                                AACCCAGTTaTTATTtACNAGAAAGAAAT
U13a04c10.t1+                                            ATTTACAAAAAACAANC
U13a09h02.t1-                                                     AANGANNT
Consensus: TTAGATACCAGCAACAAAAAAGTAAATACAAAACCCAGTTATTATTTACAAAAAAGAAAT

1920
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01e04.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a03h12.t1+ AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a05e06.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a02a12.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a08c05.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAaAAACTTTAATtTTGGTCATTTAAAA*
U13a03c11.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a010c07.t1+ AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a09d10.t1- AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a04c10.t1+ AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAaACTTTAATTTTGGTCATTTAAAAG
U13a09h02.t1- AANAANTTNNTTNTTGAACATCTTAtGGAAGGAAAAACTTTAATTTTGGTCATTTAAAA*
U13a10a04.t1+                                                             
Consensus: AAAAAATTATTTCTTGAACATCTTATGGAAGGAAAAACTTTAATTTTGGTCATTTAAAAG

1980
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01e04.t1- AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a03h12.t1+ AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACa
U13a05e06.t1- AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACaACA
U13a02a12.t1- AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a08c05.t1- AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a03c11.t1- AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a010c07.t1+ AATT*TAGTTTTA*GATAaAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a09d10.t1- AA*TNTAGTTTTAGGATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a04c10.t1+ AATT*TAGTTTTA*GATAAAGCTTTATGTAACATACTGTAAGCAtT              
U13a09h02.t1- AANT*TAGTTTTA*GATAAAGCTTTAtGTAACATACTGTAAGCATTTGACAATGACAACA
U13a10a04.t1+ GATNCCCGTTTTA*NATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA
U13a01a12.t1-           TTA*GATAAAGCTTTaTGTAACATACTGTAAGCATTTGACAATGACAACA
Consensus: AATTCTAGTTTTAGGATAAAGCTTTATGTAACATACTGTAAGCATTTGACAATGACAACA

2040
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01e04.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a03h12.t1+ AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a05e06.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a02a12.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a08c05.t1- AAAGGATAAGAAAGCCTTTGAATTAAAA                                
U13a03c11.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a010c07.t1+ AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAG                          
U13a09d10.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a09h02.t1- AAAGGATAAGAAAGCCTTTGAaTTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a10a04.t1+ AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
U13a01a12.t1- AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA
Consensus: AAAGGATAAGAAAGCCTTTGAATTAAAAAATGAGAATTTAAAAAGCATATGTAACATTTA

2100
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01e04.t1- TATAATCATTCATGGGG                                           
U13a03h12.t1+ TATAATCATTCATGGTTTCACTATCTAGAG                              
U13a05e06.t1- TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT
U13a02a12.t1- TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTNTTATATGT
U13a03c11.t1- TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT
U13a09d10.t1- TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT
U13a09h02.t1- TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT
U13a10a04.t1+ TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT
U13a09h02.t2-                     CTATCTAGAGACAGACATAACACaGTATTTTCTTATATGT
U13a07b09.t1+                                                TTTTCTTATATGT
Consensus: TATAATCATTCATGGTTTCACTATCTAGAGACAGACATAACACAGTATTTTCTTATATGT

2160
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05e06.t1- GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGAATACAATATTTTTT
U13a02a12.t1- GCTTCTAATATTTATTTTAGGG                                      
U13a03c11.t1- GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGAATACAATATTTTTT
U13a09d10.t1- GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGAATACAATATTTTTT
U13a09h02.t1- GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGaAtACAATATTTTTT
U13a10a04.t1+ GCTTCTaATATTTATTTTACAAAAAATCTAAgTAGAAa                      
U13a09h02.t2- GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGAATACAATATTTTTT
U13a07b09.t1+ GCTTCTAATATTTATTTTACAANAAATCTAAGTAGAAATATTATGAATACA         
U13a06h09.t1+                                                    ATATTTTTT
Consensus: GCTTCTAATATTTATTTTACAAAAAATCTAAGTAGAAATATTATGAATACAATATTTTTT

2220
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05e06.t1- CTTGCTTTTTAACATTgACATNGG*TTTTCCATATTTA                      
U13a03c11.t1- CTTGCTTTTTAACATTGACATATA*TTTTCCATATTTGCACATTCTTTCTAAATATAATT
U13a09d10.t1- CTTGCTTTTTAACATtGACATATATTTTTCCA                            
U13a09h02.t1- CTTGCTTTTTAACATTGACATATA*TTTTCCATATTTGCACATTCTTTCTAAATATAATT
U13a09h02.t2- CTTGCTTTTTAACATTGACATATA*TTTTCCATATTTGCACATTCTTTCTAAATATAATT
U13a06h09.t1+ CTTGCTTTTTAACATTGACATATA*TTTTCCATATTTGCACATTCTTTCTAAATATAATT
Consensus: CTTGCTTTTTAACATTGACATATATTTTTCCATATTTGCACATTCTTTCTAAATATAATT

2280
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03c11.t1- TTTAAAAAGTTAAATAATAACCAATGGAGTGAACATATGGGATTTGTGTAGCTATTACTT
U13a09h02.t1- TTTAAAAAGTTAAATAATAACcAATGGaGTGAACATATGGG                   
U13a09h02.t2- TTTAAAAAGtTAAATAATAACCAATGGAGT*AANATA                       
U13a06h09.t1+ TTTAAAAAGTTAAATAATAACCAATGGAGTGAACATATGGGATTTGTGTAgCTATTACTT
Consensus: TTTAAAAAGTTAAATAATAACCAATGGAGTGAACATATGGGATTTGTGTAGCTATTACTT

2340
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03c11.t1- TTTTGTCTGGGATTTAGATTACTTCTGAATTTTTTTGCTATTAAAAATAATGCCTCTCAA
U13a06h09.t1+ TTTTGTCTGGGATTTAGATTACTTCTGAATTTTTTTGCTATTAAAAATAATGCCTCTCAA
Consensus: TTTTGTCTGGGATTTAGATTACTTCTGAATTTTTTTGCTATTAAAAATAATGCCTCTCAA

2400
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03c11.t1- TAGTCAGGATTATTTTGGGCTCCATTCTCAAAAGTGTAAGTACTGCATTGGAGAAAATAA
U13a06h09.t1+ TAGTCAGGATTATTTTGGGCTCCATTCTCAAAAGTGTAAGTACTGCATTGGAGAAAATAA
Consensus: TAGTCAGGATTATTTTGGGCTCCATTCTCAAAAGTGTAAGTACTGCATTGGAGAAAATAA

2460
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a03c11.t1- ACATCGTAAGGCTcTTTGCCAAATTGCTTTCCAAAAGGATTATATCAAAA          
U13a06h09.t1+ ACATCGTAAGGCTCTTTGCCAAATTGCTTTCCAAAAGGATTATATCAAAATATTAGCAAT
Consensus: ACATCGTAAGGCTCTTTGCCAAATTGCTTTCCAAAAGGATTATATCAAAATATTAGCAAT

2520
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06h09.t1+ ATTGTAGAGTACCCTTTCACAGTGCCCTCAGCAGTGGCGGTGATCATGATCTTTCTAAAA
U13a06a06.t1-              CTTTCACAGTGCCCTCAGCAGTGGCGGTGATCATGATCTTTCTAAAA
U13a01a01.t1+                                                            A
Consensus: ATTGTAGAGTACCCTTTCACAGTGCCCTCAGCAGTGGCGGTGATCATGATCTTTCTAAAA

2580
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06h09.t1+ AAATATCTGGTTAATTTGATAGAGGTCAAATGTTACTTCATTTTTATTTTAATGTGTCAT
U13a06a06.t1- AAATATCTGGTTAATTTGATAGAGGTCAAATGTTACTTCAT                   
U13a01a01.t1+ GGACCCCTGGtTAATTTGATAGAGGTCAaATGTTACTTCATTTTTATTTTAATGTGTCAT
U13a05h12.t1+                        GGTCAAATGTTACTtCATTTTTATTTTAATGTGTCAT
U13a07g01.t2-                                                      NGGTCAT
Consensus: AAATATCTGGTTAATTTGATAGAGGTCAAATGTTACTTCATTTTTATTTTAATGTGTCAT

2640
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06h09.t1+ TCTTTGATTGCTGGTGAAGGAAAGTGTTTTCCACACATTTGCTGATTGTTTAGAGTTTCC
U13a01a01.t1+ TCTTTGATTGCTGGTGAAGGAAAGTGTTTTCCACACATTTGCTGATTGTTTAGAGTTTCC
U13a05h12.t1+ TCTTTGATTGCTGGTGAAGGAAAGTGTTTTCCACACATTTGCTGATTGTTTAGAGTTTCC
U13a07g01.t2- TCTTTGATTGCTGGTGAAGGAAAGTGTTTTCCACACATTTGCTGATTGTTTAGAGTTTCC
Consensus: TCTTTGATTGCTGGTGAAGGAAAGTGTTTTCCACACATTTGCTGATTGTTTAGAGTTTCC

2700
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06h09.t1+ TTTTTGGAAATTGCCTATTCACATCCTTTGCCAGTTTATCTATTGAGGCtTCAGTATT  
U13a01a01.t1+ TTTTTGGAAAttGCCtATTCACATCCTTTGCCAGTTTAtCTATTGAGGCtTCAGTATTTT
U13a05h12.t1+ TTTTTGGAAATTGCCTATTCACATCCTTTGCCAGTTTATCTATTGAGGCTTCAGTATTTT
U13a07g01.t2- TTTTTGGAAATtGCCTATTCACATCCTTTGCCAGTTTATCTATTGAGGCTTCAGTATTTT
Consensus: TTTTTGGAAATTGCCTATTCACATCCTTTGCCAGTTTATCTATTGAGGCTTCAGTATTTT

2760
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01a01.t1+ AAAACTCAATCTGATTAAGCTTTTTAAGAATATTAGTACTTTGTCTATGTAATATCNCCN
U13a05h12.t1+ AAAACTCAATCTGATTAAGCTTTTTAAGAATATTAGTACTTTGTCTATGTAATATCTCCT
U13a07g01.t2- AAAACTCAATCTGATTAAGCTTTTTAAGAATATTAGTACTTTGTCTATGTAATATCTCCT
U13a09b04.t1+                                               ATGTAATATCTCCN
U13a07a06.t1-                                                       TCTCCT
U13a04h04.t1-                                                       TCTCCT
Consensus: AAAACTCAATCTGATTAAGCTTTTTAAGAATATTAGTACTTTGTCTATGTAATATCTCCT

2820
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a01a01.t1+ CTATTTCCCCCCAAAtAAAATGCCTTTTAA                              
U13a05h12.t1+ CTATTTCCCCCCAAATAAAATGCCTTTTAATTTGCTTCTATTTATTTTTGGAAGAACAGA
U13a07g01.t2- NTATTTCCCCCCAAATAAAATGCCTTTTAATTTGNTTNTATTTATTTTTGGAAGAACAGA
U13a09b04.t1+ CTATTTCCCCCCAAATAAAATGCCTTTTAATTTGCTTCTATTTATTTTTGGAAGAACAGA
U13a07a06.t1- CTATTTCCCCCCaaaTAAAAtGCCTTTTAATTGGCTTNTATTTATTTTTGGAAGAACAGA
U13a04h04.t1- CTATTTCCCCCCaaATAAAATGCCTTTTAATTTGCTTCTATTTATTTTTGGAAGAACAGA
U13a09b04.t2+             AAATAAAATGCCTTTTAATTTGCTTCTATTTATTTTTGGAAGAACAGA
U13a04h03.t1+                                            ATTTTTGGAAGAACAGA
Consensus: CTATTTCCCCCCAAATAAAATGCCTTTTAATTTGCTTCTATTTATTTTTGGAAGAACAGA

2880
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ AGCTTACATTTATAACACaGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG
U13a07g01.t2- AGCTTACATTT                                                 
U13a09b04.t1+ AGCTTACATTTATAACACAGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG
U13a07a06.t1- aGCTTACATTTATAACACAGTTAAATATGTTAAtGTTTTTATTCTAAGTTTaATAAATTG
U13a04h04.t1- aGCTTACATTtATaACACAGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG
U13a09b04.t2+ AgCTTACATTTATAACACAGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG
U13a04h03.t1+ AGCTTACATTTATAACACAGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG
U13a01a09.t1-                                      ATTATTCTAAGTTTAATAAATTG
Consensus: AGCTTACATTTATAACACAGTTAAATATGTTAATGTTTTTATTCTAAGTTTAATAAATTG

2940
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ TACCTCCTCCAGTGATGGTAAACATATCTATTTtTTCTTGATTTCTTATATGTTgATGTT
U13a09b04.t1+ TACCTCCTCCAGTGATGGTAAACATATCTATTTTTTCTTGATTTCTTATATGTTGATGTT
U13a07a06.t1- TACCTCCTCCAGTGATGGTAAACATATCTATTTTTTCTTGATTTCTTATATGTTGATGTT
U13a04h04.t1- TACCTCCTCCAGTGATGGTAAACATATcTATTTTTTCTTGATTTCTTATAtGTTGATGTT
U13a09b04.t2+ TACCTCCTCCAGTGATGGTAAACATATCTATTTTTTCTTGATTTCTTATATGTTGATGTT
U13a04h03.t1+ TACCTCCTCCAGTGATGGTAAACATATCTATTTTTTCTTGATTTCTTATATGTTGATGTT
U13a01a09.t1- TACCTCCTCCAGTGaTGGTAAACATATCTATTTTTTCTTGATTTCTTATAtGTTGATGTT
U13a04e05.t1+                                           TTCTTATATGTTGAtGTT
Consensus: TACCTCCTCCAGTGATGGTAAACATATCTATTTTTTCTTGATTTCTTATATGTTGATGTT

3000
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a09b04.t1+ TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a07a06.t1- TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a04h04.t1- TcAcATTTAATTTTTAAATTCCCTTGGAACTAAtTTTGTTGATTGATTcTAATcTAAATA
U13a09b04.t2+ TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a04h03.t1+ TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a01a09.t1- TCACATTTAATTTTTAAATTCCCtTGGAACTAATTTTGTtGATTGATTCTAATCTAAATA
U13a04e05.t1+ TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA
U13a05a02.t1+                                    TTGTTGATTGATTCtAATCTAAATA
U13a02h12.t1+                                                TCTAATCTAAATA
Consensus: TCACATTTAATTTTTAAATTCCCTTGGAACTAATTTTGTTGATTGATTCTAATCTAAATA

3060
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACaCACATATATACA
U13a09b04.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATANATACACACATATATACA
U13a07a06.t1- TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13a04h04.t1- TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13a09b04.t2+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATANATACACACATATATACA
U13a04h03.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTACATATACACACATATATACA
U13a01a09.t1- TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13a04e05.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13a05a02.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13a02h12.t1+ TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
U13e07e06.t2+              ATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA
Consensus: TATGTATGTGTGCATATATGTGTGTGTGTATGTGTGTGTATATATACACACATATATACA

3120
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ TATGTGTACACACACATATATATACATATATGTACACaCaTACATATATGTATACACACA
U13a09b04.t1+ TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA
U13a07a06.t1- TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA
U13a04h04.t1- TATGTGTACACACACATATATATACATATATGTACACACATACATaTATGTATACACACA
U13a09b04.t2+ TATGTGTACACACACATATATATACa                                  
U13a04h03.t1+ TATGTGTACACACACATATATATACATATATGTACACaCATACATATATGTATACACACA
U13a01a09.t1- TATGTGTACACACACATATATATACATATATGTACACACATACAT               
U13a04e05.t1+ TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA
U13a05a02.t1+ TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA
U13a02h12.t1+ TATGTGTACACACACAtATATATACAta                                
U13e07e06.t2+ TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA
Consensus: TATGTGTACACACACATATATATACATATATGTACACACATACATATATGTATACACACA

3180
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a05h12.t1+ TATATACATATATaTGTATGTGTATATACATGTATGTGTATATATACATACATA      
U13a09b04.t1+ TATATACATATATATGTATGTGTATATATATGTATGTGTATAtATACATACATATGCGTA
U13a07a06.t1- TATATACATATAtATGTATGTGTATA                                  
U13a04h04.t1- TATATACATATATATGTATGTGTATATATATGTATGTGTATATATACATANATATG*G  
U13a04h03.t1+ TATATACATAtATATGTATGTGTATATATATGTATGTGTATATATACATACATATGCNTA
U13a04e05.t1+ TATATACATATATATGTATGTGTATATATATGTATGTGTATATATACATACATATGCGTA
U13a05a02.t1+ TATATACATATATATGTATGTGTATATATATGTATGTGTATATATACATACATATGCGTA
U13e07e06.t2+ TATATACATATATATGTATGTGTATATATATGTATGTGTATATATACATACATATGCGTA
Consensus: TATATACATATATATGTATGTGTATATATATGTATGTGTATATATACATACATATGCGTA

3240
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a09b04.t1+ TGTATGTGTATATATACATACATATGCGTATGTATGTGTATATATACATACATATGC   
U13a04h03.t1+ TGTATGTGTATAtATACATACATATGCGTATGTATGTGTATATATACATACATATGCGTA
U13a04e05.t1+ TGTATGTGTATATATACATACATATGCGTATGTATGTGTATATATACATACATATGCGTA
U13a05a02.t1+ TGTATGTGTATATATACATACATATGCGTATGTATGTGTATATATACATACATATGCGTA
U13e07e06.t2+ TGTATGTGTATATATACATACATATGCGTATGTATGTGTATATATACATACATATGCGTA
U13a010g11.t1+                        ATGCGTATGTATGTGTATATATACATACATATGCGTA
Consensus: TGTATGTGTATATATACATACATATGCGTATGTATGTGTATATATACATACATATGCGTA

3300
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04h03.t1+ TGTGTGTGTATAtATACATACATATGC*TGTGTGTGTGTATACATACAC           
U13a04e05.t1+ TGTGTGTGTATATATACATACATATGCGTGTGTGTGTGTATATATACANACATATGCGTA
U13a05a02.t1+ TGTGTGTGTATATATACATACATATGCGTGTGTGTGTGTATATATACATACATANGCGTA
U13e07e06.t2+ TGTGTGTGTATATATACATACATATGCGTGTGTGTGTGTATATAC               
U13a010g11.t1+ TGTGTGTGTATATATACATACATATGCGTGTGTGTGAGTAAAN                 
U13a04h01.t1+                                  GTGTATATATATACNTACATATNCNTA
Consensus: TGTGTGTGTATATATACATACATATGCGTGTGTGTGTGTATATATACATACATATGCGTA

3360
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04e05.t1+ TGTGTGTGTATATATANACACACACACNCANATNCACACACACACACACACACACACACA
U13a05a02.t1+ TGTGTGTGTATATANANACACACACACGCACATACACACACACACACACACACACACACA
U13a04h01.t1+ TGTGTGTGTATATATANACACACACACNCATATACTCACTCNCACACACACA        
Consensus: TGTGTGTGTATATATANACACACACACGCANATACACACACACACACACACACACACACA

3420
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04e05.t1+ CACACACACNCACTAATCNGTT                                      
U13a05a02.t1+ CACACACACACACTAATCNNTT                                      
Consensus: CACACACACACACTAATCNGTT                                      

CONTIG 2

Statistics

Contig id: 2
Contig length: 24499
Avg. contig coverage: 8.49973
Consensus contains: A: 7683 C: 4937 G: 4797 T: 7038 N: 44 *: 0

Num reads: 496
Avg. read length: 419.829
Reads contain 205637 bases, 1082 Ns and 1516 gaps.

Contig

0
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04d08.t1- GTCCCCCCCCCCCCCCTGCAGGNGCAGAACTGGTAGGTATGGAAGATNTCTAGAATTCGG
U13a04h06.t1-   CCCCCCCCCCCCCCTGCAGGCGCAGAACTGGTAGGTATGGAAGATTTNTAGAATTCGG
Consensus: GTCCCCCCCCCCCCCCTGCAGGCGCAGAACTGGTAGGTATGGAAGATTTCTAGAATTCGG

60
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04d08.t1- CCGAAACGGCCAAAAAAAGCCCGNTCATTAAGCGGGCTAATTCGCCTCGAGGTGGCTTAT
U13a04h06.t1- CCGAAACGGCCAAAAAAAGCCCGCTCATTAAGCGGGCTAATTCGCCTCGAGGTGGCTTAT
U13a06e06.t1+                           TTNAAGCGGGCTAATTCGCCTCGAGGTGGCTTAT
Consensus: CCGAAACGGCCAAAAAAAGCCCGCTCATTAAGCGGGCTAATTCGCCTCGAGGTGGCTTAT

120
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04d08.t1- CGAAATTAATACGACTCACTATAGGGAGACCCAAGCTTAGGATCTTGCCACTGCACTTGA
U13a04h06.t1- CGAAATTAATACGACTCAcTATAGGGAGACCCAAGCTTAGGATCTTGCCAcTGCACTTGA
U13a06e06.t1+ CGAAATTAATACGACTCACTATAGGGAGACCCAAGCTTAGGATCTTGCCACTGCACTTGA
U13a06e02.t1-                                                           Ga
Consensus: CGAAATTAATACGACTCACTATAGGGAGACCCAAGCTTAGGATCTTGCCACTGCACTTGA

180
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04d08.t1- GCCTGGGCAACAGAGCAAGACCCTGTTTCAAAAAAAAATTCAAGATATTCATCAGAATCT
U13a04h06.t1- GCCTGGGCAACAGAGCAAGACCCTGTTTCAAAAAAAAATTCAAGATATTCATcAGAATcT
U13a06e06.t1+ GCCTGGGCAACAGAGCAAGACCCTGTTTCAAAAAAAAATTCAAGATATTCATCAGAATCT
U13a06e02.t1- GCCTGGGCAAcAGAGCAAgACCcTGTTTCAAAAAAAAATTCAAGATATTCATCAGAaTCT
U13a09f10.t1-                                  AGAAGTTGAAGATATTCATCAGAATCT
Consensus: GCCTGGGCAACAGAGCAAGACCCTGTTTCAAAAAAAAATTCAAGATATTCATCAGAATCT

240
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04d08.t1- TAGAATGTGAGAGTtATAGAAAGTGCCTTGGGGGTTATGTAGCNTACCAGCTTCATT   
U13a04h06.t1- TAGAATGTGAGAGTTATAGAAAGTGCCTTGGGGGTTATGTAGCCTACCAGCTTCATTTTA
U13a06e06.t1+ TAGAATGTGAGAGTTATAGAAAGTGCCTTGGGGGTTATGTAGCCTACCAGCTTCATTTTA
U13a06e02.t1- TAGAATGTGAGAGTTATAGAAAGTGCCTTGGGGGTTATGTAGCCTACCAGcTTCATTTTA
U13a09f10.t1- TAGAATGTGAGAGTTATAGAAaGTGCCTTGGGGGT                         
U13a04d07.t1-                  AGAAAGTGCCTTGGGGGTTATGTAGCCTACCAGCTTCATTTTA
Consensus: TAGAATGTGAGAGTTATAGAAAGTGCCTTGGGGGTTATGTAGCCTACCAGCTTCATTTTA

300
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04h06.t1- TATAAGAATTTGGAATTTTCTTATGCAACGCAGTCACATGACTTAAGATTTCAAGGATAG
U13a06e06.t1+ TATAAGAATTTGGAATTCTCTTATGCAACGCAGTCACATGACTTAAGATTTCAAGGATAG
U13a06e02.t1- TATAAGAATTTGGAATTTTCTTATGCAACGCaGTCACATGACTTAAGATTTCAAGGATAG
U13a04d07.t1- TATAAGAATTTGGAATTCTNTTATGCAACGCAGTCACATGACTTAAGATTTCAAGGATAG
Consensus: TATAAGAATTTGGAATTNTCTTATGCAACGCAGTCACATGACTTAAGATTTCAAGGATAG

360
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a04h06.t1- TCAATGGCAGAATGGGAGCAATAGCTCAG                               
U13a06e06.t1+ TCAATGGCAGAATGGGAGCAATAGCTCAGGTTTCCTCACACTGATAGCAATAGGAAGCCA
U13a06e02.t1- TCAATGGCAGAATGGGAGCAATAGCTCAGGTTTCCTCACACTGATAGCAATAGGAAGCCA
U13a04d07.t1- TCAATGGCAGAATGGGAGCAATAGCTCAGGTTTCCTCACACTGATAGCAATAGGAAGCCA
U13a05h04.t1+                                                CAATAGGAAACCA
Consensus: TCAATGGCAGAATGGGAGCAATAGCTCAGGTTTCCTCACACTGATAGCAATAGGAAGCCA

420
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ ACAAATTCTTAGGCAGACAGGGATGGGTCCCTGGTGAAACTCGACCTTCAAGCCAAGGAC
U13a06e02.t1- ACAAATTCTTAGGCAGACAGGGATGGGTCCCTGGTGAAACTCGACCTTCAAGCCAAGGAC
U13a04d07.t1- ACAAATTCTTAGGCAGACAGGGATGGGTCCCTGGTGAAACTNGACCTTCAAGCCAAGGAC
U13a05h04.t1+ ACaAATTCTTAGGCAGACAGGGATGGGTCCCTGGTGAAACTCGACCTTCAAGCCAAGGAC
U13a04a04.t1+                               CTGGTGAAACTCAACCTTCAAGCCAAGGAC
U13a02h09.t1+                                                     CCAANGAC
Consensus: ACAAATTCTTAGGCAGACAGGGATGGGTCCCTGGTGAAACTCGACCTTCAAGCCAAGGAC

480
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ AGTCTGAAGCCCTCAAACTACCAGTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a06e02.t1- AGTCTGAAGCCCTCAAACTACCAGTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a04d07.t1- AGTCTGAAGCCCTCAAACTACCAGTTNTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a05h04.t1+ AGTCTGAAGCCCTCAAACTACCAGTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a04a04.t1+ AGTCTGAACCCCTCAAACTACCAGTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a02h09.t1+ ANTCTGAANCCCTCAAACTACCANTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC
U13a04f07.t1+          CCCTCAAACTACCANTTCTGGACANANTCCACAGACTGCAGTGACAACTTC
Consensus: AGTCTGAAGCCCTCAAACTACCAGTTCTGGACAGAGTCCACAGACTGCAGTGACAACTTC

540
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCcAGGCCAAGGTTCCgGGCCAAGCC
U13a06e02.t1- CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC
U13a04d07.t1- CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC
U13a05h04.t1+ CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAgCc
U13a04a04.t1+ CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC
U13a02h09.t1+ CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC
U13a04f07.t1+ CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC
Consensus: CATTCCCATTGGGTGCAATCAGCCCCTGATTGGTCCCAGGCCAAGGTTCCGGGCCAAGCC

600
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ TTCCCTTCAGCCCCCAGTTTGTCCcAGGCCAAGCTTTCACTTCAGTCCCcGATTGCTTCT
U13a06e02.t1- TTCCCTTCAGCCCCCAGTTTGTCCCAGGCCAAGCTTTCACTTCAGTCCCCGATTGCTTCT
U13a04d07.t1- TTCCCTTCAGCCCCCAGTTTGTCCCAGGCCAAGCTTTCAcTTCAGTCCCCGATTGCTTCT
U13a05h04.t1+ TTCCCTTCagCCCCCAGTtTGTCCCAGGCCAAGCTtTCACTTCAGTCCCCGATTGCTTCT
U13a04a04.t1+ TTCCCTTCAgCCCCCAGTTTGTCCCAGGCCAACCTTTCACTTCAGTCCCCgATTGCTTCT
U13a02h09.t1+ TTCCCTTCaGCCCCCAGTTTGTCCCAGGCCAAGCTTTCACTTCAGTCCCCGATTGCTTCT
U13a04f07.t1+ TTCCCTTCAGCCCCCAGTTTGTCCCAGGCCAAGCTTTCACTTCAGTCCCCgATTGCTTCT
U13a04a03.t1-                                             GTCCCcGATtGCTTCT
U13a03c05.t1+                                                           CT
Consensus: TTCCCTTCAGCCCCCAGTTTGTCCCAGGCCAAGCTTTCACTTCAGTCCCCGATTGCTTCT

660
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ TTACACTATCGTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA
U13a06e02.t1- TTACACTATCGTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA
U13a04d07.t1- TTACACTATGGTACCACTTTCTGAA**G                                
U13a05h04.t1+ TTACACTATCGTACCACTTTCTGAA*TGAGACAgCCCTGGGAAAGGGCANGAAANTGCCA
U13a04a04.t1+ TTACACTATCGTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA
U13a02h09.t1+ TTACACTATCNTACCACTTTCTGAATTNANACAGCCCTGGGAAAGGG             
U13a04f07.t1+ TTACACTATCGTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA
U13a04a03.t1- TTACACTATCGTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAANGCCA
U13a03c05.t1+ TTACACTATCCTACCACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCANGAAAATGCCA
U13a05f03.t1+    CACTATCGTACcACTTTCTGAA*TGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA
U13a04a05.t1+                                                   AAAAATGCCa
Consensus: TTACACTATCGTACCACTTTCTGAATTGAGACAGCCCTGGGAAAGGGCAGGAAAATGCCA

720
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e06.t1+ CACACAGANCCCGGACaCAGTGACTACACcTAAGTGAGTGCTCCGGGACTGTGGGCA   
U13a06e02.t1- CACACAGAGCCCGGACACAGTGACTACACCTAAGTGAGTGCTCCGGGACTGTGGGCAAAG
U13a05h04.t1+ CACACAGAGCCCGGACACaGTGACTACACcTAAgTGAGTGCTCCGGGACTGTGGGCAAAg
U13a04a04.t1+ CACACANAGCCCGGACACAGTGACTACaCCTAAGTGAGTGCTCCGGGACTGTGGGCAAAG
U13a04f07.t1+ CACACNGAGCCCGGACACAGTGACTACACCTAAgTGAGTGCTCCGGGACTGTGGGCAAAG
U13a04a03.t1- CAcACAGAGCCCGGACACAGTGACTACACcTAAGTGAGTGCTCCGGGACtGTGGGCAAAG
U13a03c05.t1+ CACACATAGCCCGGACACAGTGACTACACCTAAGTGAGTGCTCCGGGACTGTGGGCAAAG
U13a05f03.t1+ CACACAGAGCCCGGACACAGTGACTACACCTAAGTGAGTGCTCCGGGACTGTGGGCAAAG
U13a04a05.t1+ CACACAGANCCCGGACACAGTGACTACACCTAAgTGAGTGCTCCGGGACTGTGGGCAAAG
U13a08h05.t1-                                         CTCCGGGACTGTGGGCAAAG
Consensus: CACACAGAGCCCGGACACAGTGACTACACCTAAGTGAGTGCTCCGGGACTGTGGGCAAAG

780
 |    .    |    .    |    .    |    .    |    .    |    .    
U13a06e02.t1- CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a05h04.t1+ CACANTCAGTCaTCCTGAGTGAACATcCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a04a04.t1+ CACNGTCAGTCATCCTGAGTGAACATCCAgAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a04f07.t1+ CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a04a03.t1- cACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTcTCCTcTTG
U13a03c05.t1+ CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a05f03.t1+ CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a04a05.t1+ CACATTCAGTCATCCTgAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a08h05.t1- CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG
U13a05g11.t1+                                                       CTCTTG
Consensus: CACAGTCAGTCATCCTGAGTGAACATCCAGAAATAGGGACCTGATCAGTTTCTCCTCTTG